It is A.D. 2009 and the human race is caught in a war between giant humanoids, male Zentrans and female Meltrans. Returning from the edge of our solar system after making a space fold, the SDF-1 Macross makes the long journey back to Earth with survivors of South Ataria Island.

Ace female test pilot Kusomoto Elle humiliates macho tank driver Lt. Kilgore in the first demonstration of the advanced personal battle tank, the MADOX. Kilgore vows revenge, and gets his chance when the army rather carelessly loses the prototype in Tokyo. The MADOX is found by engineering student Sujimoto Kouji, who doesn't take the time to completely read the manual and ends up zooming around Tokyo trapped in a machine he doesn't quite know how to operate. Guess who gets the job of stopping the now mobile missing MADOX? Poor Kouji. If he's late for his date, it's over between him and his girlfriend. His current attire redefines the term "over-dressed." And to top it all off, Kilgore wants to make him late- as in "the late Kouji!"

The plot features R and the Camera Club going on a stamp tour throughout Japan, with the threat of their club being closed down unless they can collect all the stamps by 6:00 PM.

Flash Back 2012 is Minmay's farewell concert. Featuring some of her best songs, the music is performed over various scenes and events taken from the first Macross television series as well as Macross: Do You Remember Love film. Also included is a newly animated closing sequence showing the launch of Misa's colony vessel, the Megaroad-01, into space.

Years after the events of Megazone 23 II, the only city on Earth is the supposedly idyllic Eden. There lives Eiji Takanaka, a B Level hacker who has just been accepted into EX, the organization that controls Eden. However, before his first day on the job, he becomes embroiled in a network war, a legendary figure named EVE, and a plot to re-inhabit the Earth.

As Akira Fudo wakes up, he finds himself in a "chibi" form, which he thinks doesn't fit a hero such as himself. He is not the only one that has changed. Together with Ryo and Miki, they set out on a journey to restore their proper appearances and find out what caused this change. During their adventure they find several other characters from the world of Go Nagai, such as Mazinger Z, Dr. Hell, Baron Ashura, and others.